Information for motif20


Reverse Opposite:

p-value:1e-21
log p-value:-4.919e+01
Information Content per bp:1.654
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets102.3 +/- 56.4bp
Average Position of motif in Background46.6 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCRATCTG--
GCCATCTGTT

MA0461.1_Atoh1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCRATCTG
GCCATCTG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----GCRATCTG-----
CCNNACCATCTGGCCTN

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCRATCTG--
RCCATMTGTT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCRATCTG----
--GGTCTGGCAT

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCRATCTG----
GCCAGCTGBTNB

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCRATCTG----
GWAAYHTGABMC

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCRATCTG--
--CAGCTGNT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCRATCTG
YSTTATCT-

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCRATCTG--
CGACCATCTGTT