Information for motif24


Reverse Opposite:

p-value:1e-19
log p-value:-4.567e+01
Information Content per bp:1.674
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif13.43%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets109.4 +/- 50.5bp
Average Position of motif in Background146.0 +/- 51.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTGGAAATCAGG---
AAGGCGAAATCATCGCA

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGGAAATCAGG
-TGGAAAA----

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAATCAGG
AATGGAAAAT---

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGAAATCAGG
GTGGAT------

MA0480.1_Foxo1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTGGAAATCAGG-
--TGTAAACAGGA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAATCAGG
CSTGGGAAAD---

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGGAAATCAGG
---GTAAACAG-

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGGAAATCAGG-
---CAAATCACTG

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTGGAAATCAGG
NNNNGGGGGAAGANGG

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGGAAATCAGG
AGAGGAA------