Information for motif25


Reverse Opposite:

p-value:1e-18
log p-value:-4.334e+01
Information Content per bp:1.870
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.19%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets107.0 +/- 62.4bp
Average Position of motif in Background116.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTTTAA--
NNNNTTTTTTTTTNAAC

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTTTAA--
GNATTTTTTTTTTGANC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTAA----
TTTTTTTTCNNGTN

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTTAA---
NNTTTTTCTTATNT

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTTTAA-
NTNTTGTTGTTTGTN

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTAA---
NNTTTTGTTTTGATNT

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTTAA----
NNTTTNTTTTNGNNN

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTAA----
NNNTTTTAATTAANNNN

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTAA-----
NNNTTTNTAATACNG

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTAA----
TCTTTANTAATANN