Information for motif3


Reverse Opposite:

p-value:1e-33
log p-value:-7.762e+01
Information Content per bp:1.725
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif15.28%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets106.6 +/- 68.0bp
Average Position of motif in Background88.7 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCTGTCTTC
VBSYGTCTGG

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCTGTCTTC-
TCCTGTTTACA

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCCTGTCTTC-
-----GCTTCC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCTGTCTTC
--CTGTCTGG

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTGTCTTC-
---TGTTTACA

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCTGTCTTC
--CTGTTTAC

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCTGTCTTC
--TWGTCTGV

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTGTCTTC
-GCTGTG---

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTGTCTTC---
-SCTGTCARCACC

Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGTCTTC
GTCATGCHTGRCTGS