Information for motif30


Reverse Opposite:

p-value:1e-17
log p-value:-4.049e+01
Information Content per bp:1.759
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.72%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets126.1 +/- 45.4bp
Average Position of motif in Background50.0 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GYSCCCTT---
GGTCCCGCCCCCTTCTC

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GYSCCCTT--
ANCGCGCGCCCTTNN

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GYSCCCTT----
NNGCACCTTTCTCC

MA0155.1_INSM1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GYSCCCTT---
CGCCCCCTGACA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GYSCCCTT-
TTCCCCCTAC

MA0592.1_ESRRA/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GYSCCCTT--
NGTGACCTTGG

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GYSCCCTT--
NTGACCTTGA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GYSCCCTT--
AASCACTCAA

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GYSCCCTT--
NTCGCGCGCCTTNNN

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GYSCCCTT
GTGACCTT