Information for motif33


Reverse Opposite:

p-value:1e-14
log p-value:-3.305e+01
Information Content per bp:1.736
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif12.96%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets107.4 +/- 58.8bp
Average Position of motif in Background48.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGGTGGGGTCAG---
AGAGCGGGGTCAAGTA

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGTGGGGTCAG
--GTGGGGTGAT

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGGTGGGGTCAG
--ATGGGGTGAT

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGGGTCAG
NATNGGGNGGGGANAN

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGTGGGGTCAG--
--GTGGCGTGACNG

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGGGGTCAG----
NTNNNGGGGTCANGNNN

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGTGGGGTCAG----
GGCGAGGGGTCAAGGGC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGTGGGGTCAG---
CGCGCCGGGTCACGTA

MA0596.1_SREBF2/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGGTGGGGTCAG
--ATGGGGTGAT

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGTGGGGTCAG
--GTGGAT----