Information for motif34


Reverse Opposite:

p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.620
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets107.3 +/- 53.0bp
Average Position of motif in Background146.6 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGTCATGTTCT--
NNGTANTGTTTTNC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGTCATGTTCT
--GTCATN----

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGGTCATGTTCT---
-----CTGTTCCTGG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGTCATGTTCT
AGGTCA------

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGGTCATGTTCT
TATTCAAGGTCATGCGA-

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGTCATGTTCT
ATCAAGGTCA------

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGTCATGTTCT
AGGTCAAGGTCA

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGTCATGTTCT-
---CCATGTGCTT

MA0007.2_AR/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGTCATGTTCT-
GNACANNNTGTTCTT

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGGTCATGTTCT
TCTCAAAGGTCACGAG--