Information for motif4


Reverse Opposite:

p-value:1e-30
log p-value:-6.950e+01
Information Content per bp:1.688
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif17.59%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets103.5 +/- 55.3bp
Average Position of motif in Background149.7 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0109.1_Hltf/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTCCATAG--
AACCTTATAT

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCCATAG
TATACATA-

MA0077.1_SOX9/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCCATAG
GAACAATGG

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCCATAG------
TGTTCCCATTGTGTACT

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCCATAG---
CTCACACAATGGCGC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCCATAG
ATCACCCCAT--

MA0078.1_Sox17/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCCATAG-
GACAATGNN

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCATAG
DGATCRATAN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCATAG
TTCCCCCTAC

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCATAG--
GCNGCCATCTTG