Information for motif41


Reverse Opposite:

p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.757
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets80.7 +/- 44.9bp
Average Position of motif in Background182.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTSTGTATA---
ANTCCTTTGTCTNNNN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTCTSTGTATA
ACTTTCACTTTC--

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTSTGTATA
ACTTCCTGTT----

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTCTSTGTATA---
----TGTGGATTNNN

MA0508.1_PRDM1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTSTGTATA
TCACTTTCACTTTCN-

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTCTSTGTATA
TTCCTCT-----

MA0474.1_Erg/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTSTGTATA
CCACTTCCTGT-----

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTSTGTATA
ACTTTCACTTTC--

MA0514.1_Sox3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTCTSTGTATA
CCTTTGTTTT----

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTSTGTATA
RSTTTCRSTTTC--