Information for motif9


Reverse Opposite:

p-value:1e-25
log p-value:-5.856e+01
Information Content per bp:1.702
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif15.74%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets97.1 +/- 46.7bp
Average Position of motif in Background38.5 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTATTTCTGAW--
NNTTTTTCTTATNT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCTGAW
GTTTCACTTCCG--

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTTCTGAW----
NNTNNTGTCTGGNNTNG

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTTATTTCTGAW
ACTTTCGTTTCT---

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTTCTGAW---------
NNTNANTTCTTATCTCTANANN

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTATTTCTGAW---
TAGTATTTCCGATCTT

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTTATTTCTGAW---
NAGTTTCABTHTGACTNW

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTATTTCTGAW----
-AGNGTTCTAATGANN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTTATTTCTGAW
-VBSYGTCTGG-

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTATTTCTGAW----
-NNNTTTNTAATACNG