Information for motif12


Reverse Opposite:

p-value:1e-15
log p-value:-3.665e+01
Information Content per bp:1.595
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif12.42%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets109.8 +/- 56.0bp
Average Position of motif in Background111.6 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCGACGGCG--
ANTGCCTGAGGCAAN

PB0131.1_Gmeb1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCGACGGCG----
TGGGCGACGTCGTTAA

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCGACGGCG
-NCGTCAGC-

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCCGACGGCG
NNTTTANNCGACGNA-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCGACGGCG--
NTNGCCTCAGGCNNN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCGACGGCG
CCAGACAG--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCGACGGCG
CCAGACRSVB

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCGACGGCG--
YCCGCCCACGCN

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCGACGGCG--
CCCCCGCCCCCGCC

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCGACGGCG----
TCCGCCCCCGCATT