Information for motif13


Reverse Opposite:

p-value:1e-15
log p-value:-3.665e+01
Information Content per bp:1.643
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif12.42%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets101.2 +/- 62.6bp
Average Position of motif in Background72.3 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACAGCCCCAAG---
CATGGCCCCAGGGCA

MA0003.2_TFAP2A/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACAGCCCCAAG---
CATTGCCTCAGGGCA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACAGCCCCAAG----
----GCCTCAGGGCAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CACAGCCCCAAG----
----SCCTSAGGSCAW

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACAGCCCCAAG----
-ATTGCCTGAGGCAAT

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACAGCCCCAAG-
--AAACCACAGAN

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CACAGCCCCAAG----
--TTGCCCTAGGGCAT

MA0510.1_RFX5/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CACAGCCCCAAG
CTCCCTGGCAACAGC

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACAGCCCCAAG-
---ANCCGGAAGT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CACAGCCCCAAG----
-ATTGCCTGAGGCGAA