Information for motif14


Reverse Opposite:

p-value:1e-15
log p-value:-3.665e+01
Information Content per bp:1.732
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif12.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets92.5 +/- 47.8bp
Average Position of motif in Background98.6 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:TGAGAGGCCTGG
----AGGCCTNG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TGAGAGGCCTGG
----AGGCCTAG

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGAGAGGCCTGG-----
---CAGGCCNNGGCCNN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGCCTGG
GGTTAGAGACCT--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGGCCTGG
CTTGAGTGGCT---

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGAGAGGCCTGG----
-CAAAGGCGTGGCCAG

MA0524.1_TFAP2C/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGAGAGGCCTGG-------
----TGCCCTGGGGCNANN

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAGGCCTGG
NNATTGACAGGTGCTT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGGCCTGG
TTGAGTGSTT---

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGAGAGGCCTGG--
----TGACCTTGAN