Information for motif15


Reverse Opposite:

p-value:1e-15
log p-value:-3.665e+01
Information Content per bp:1.637
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif12.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets100.8 +/- 58.6bp
Average Position of motif in Background127.1 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTTTGAGAAGCT
-----NGAAGC-

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTGAGAAGCT
-CTTGAGTGGCT

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GTTTGAGAAGCT--
-------AAGCTTG

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTTGAGAAGCT
-CSTGGGAAAD-

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGAGAAGCT---
NNNTTAGGTAGCNTNT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTTTGAGAAGCT
-CTYRAGTGSY-

CHR/Cell-Cycle-Exp/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTTTGAGAAGCT
CGGTTTCAAA----

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GTTTGAGAAGCT
--TTGAGTGSTT

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGAGAAGCT---
NNTGTAGGTAGCANNT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GTTTGAGAAGCT--------
-----AGATGCTRCTRCCHT