Information for motif16


Reverse Opposite:

p-value:1e-15
log p-value:-3.663e+01
Information Content per bp:1.652
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif9.94%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.4 +/- 53.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCTAGGGWAG
AAGGCAAGTGT--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCTAGGGWAG
AGGCCTNG----

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTAGGGWAG-
CAGGCCNNGGCCNN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGCTAGGGWAG
TWGTCTGV-----

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCTAGGGWAG
AGGCCTAG----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCTAGGGWAG
-NGCTN------

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGCTAGGGWAG
CAAAGGCGTGGCCAG

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGCTAGGGWAG
-GGCGCGCT---

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGGCTAGGGWAG
-GGGGGGGG---

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGGCTAGGGWAG
AAGCTTG-----