Information for motif18


Reverse Opposite:

p-value:1e-15
log p-value:-3.489e+01
Information Content per bp:1.743
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif15.53%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets102.6 +/- 63.2bp
Average Position of motif in Background122.3 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCATA----
GACCACATTCATACAAT

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTCATA-----
ACATTCATGACACG

MA0523.1_TCF7L2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCATA---
TNCCTTTGATCTTN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCATA----
ATTTCCTTTGATCTATA

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCATA----
AATCCCTTTGATCTATC

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCATA-
CCTTTGATGT

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTCATA----
NNTTCCTTTGATCTANA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCATA-
TNCCTTTGATGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTCATA----
NNTTCCTTTGATCTNNA

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTTTCATA---
CCTTTTATAGNC