Information for motif19


Reverse Opposite:

p-value:1e-14
log p-value:-3.395e+01
Information Content per bp:1.758
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets113.1 +/- 45.6bp
Average Position of motif in Background141.1 +/- 81.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0528.1_ZNF263/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAAGGAGGGAG----------
-GGAGGAGGAGGGGGAGGAGGA

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGAAGGAGGGAG--
---GGGCGGGAAGG

MA0469.1_E2F3/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAGGAGGGAG
NNGTGNGGGCGGGAG

MA0080.3_Spi1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAAGGAGGGAG---
AAAAAGAGGAAGTGA

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAAGGAGGGAG
-GGGGGCGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGAAGGAGGGAG
----GGGGGGGG

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAAGGAGGGAG
GGGAGGACNG--

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAAGGAGGGAG----
-GGGGGGGGGGGGGGA

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAAGGAGGGAG------
GGAAGGAAGGAAGGAAGG

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGAAGGAGGGAG-
-----CAGGAAGG