Information for motif2


Reverse Opposite:

p-value:1e-20
log p-value:-4.802e+01
Information Content per bp:1.747
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif14.91%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets106.2 +/- 59.0bp
Average Position of motif in Background110.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ARAAGTAG-
---NGAAGC

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ARAAGTAG
GGTAAGTA-

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ARAAGTAG-----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ARAAGTAG-----
ATGTACAGTAGCAAAG

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ARAAGTAG-
GGGAATTGTAGT

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ARAAGTAG-----
NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ARAAGTAG-----
NNTGTAGGTAGCANNT

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ARAAGTAG--
AGAGGAAGTG

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ARAAGTAG---
AAAAAGAGGAAGTGA

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ARAAGTAG-
-CAGGAAGG