Information for motif20


Reverse Opposite:

p-value:1e-14
log p-value:-3.395e+01
Information Content per bp:1.790
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets118.2 +/- 52.4bp
Average Position of motif in Background59.6 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCCGCTGC--
CACAGCTGCAG

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCTGC----
TCNCCTGCTGNGNNN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCTGC
NYTTCCCGCC--

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCGCTGC-----
CTCAGCAGCTGCTACTG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCTGC
NNTTCCCGCCC-

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCTGC----
TNTCCTGCTGTGNNG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCTGC
CAGCAGCTGN

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCTGC----
NNTCCTGCTGTGNNN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGCTGC
NNACAGCTGC

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCTGC
GCCATCTG-