Information for motif21


Reverse Opposite:

p-value:1e-14
log p-value:-3.395e+01
Information Content per bp:1.792
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets88.3 +/- 46.6bp
Average Position of motif in Background113.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCAA---
ANATTTTTGCAANTN

MA0102.3_CEBPA/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGCAA-
NATTGTGCAAT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTTTGCAA
NATGTTGCAA

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCAA--
ATTGTGCAATA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAA-
TTATGCAAT

MA0507.1_POU2F2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCAA--
TTCATTTGCATAT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAA--
ATTTGCATAT

MA0152.1_NFATC2/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTTGCAA
TTTTCCA-

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTTGCAA--
ATTTGCATAA

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGCAA-
-CTTGGCAA