Information for motif23


Reverse Opposite:

p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.800
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif9.32%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets61.6 +/- 43.5bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTATCAAC---
SCTGTCARCACC

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTATCAAC---
CCGCATAGCAACGGA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTATCAAC--
SCCTAGCAACAG

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTATCAAC---
TACCATAGCAACGGT

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------CTATCAAC-------
TGTGACCCTTAGCAACCGATTAA

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTATCAAC
GGCCATTAAC

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTATCAAC----
CGACCCAATCAACGGTG

MA0510.1_RFX5/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTATCAAC---
CTCCCTGGCAACAGC

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTATCAAC-----
NNNNCTGTTAACNNTNN

MA0133.1_BRCA1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTATCAAC--
---ACAACAC