Information for motif24


Reverse Opposite:

p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.625
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif9.32%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets81.5 +/- 41.3bp
Average Position of motif in Background115.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTCGCGG
GGGGGGGG

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTCGCGG----
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGTCGCGG-
TGGGTGGGGC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTCGCGG-
GGGGNGGGGC

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCGCGG---
AGGTCAAGGTCA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTCGCGG
AGGTCA---

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GGTCGCGG-
AGAGCGGGGTCAAGTA

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTCGCGG------
NAGANTGGCGGGGNGNA

MA0111.1_Spz1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTCGCGG-
AGGGTAACAGC

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTCGCGG---
GGCGGGGGCGGGGG