Information for motif25


Reverse Opposite:

p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.457
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif11.18%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets90.5 +/- 53.4bp
Average Position of motif in Background113.1 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGGTTTAAG-
-TGGTTTCAGT

PB0184.1_Tbp_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGTTTAAG-----
CCGATTTAAGCGACC

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCGGTTTAAG---
TGAACCGGATTAATGAA

MA0151.1_ARID3A/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGGTTTAAG
----TTTAAT

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGGTTTAAG
TTGCCCGGATTAGG

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGGTTTAAG--------
-NTNNTTAAGTGGNTNAN

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGGTTTAAG----
----TTTAATTGCN

MA0480.1_Foxo1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGGTTTAAG
TCCTGTTTACA

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCGGTTTAAG--------
-NTNNTTAAGTGGTTANN

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGGTTTAAG----
NTTGTTTACGTTNN