Information for motif26


Reverse Opposite:

p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.719
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif11.18%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets113.2 +/- 48.8bp
Average Position of motif in Background117.5 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:YTCTGTCCCAGK
--CTGTTCCTGG

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----YTCTGTCCCAGK
TGACCTTTGCCCTAN-

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----YTCTGTCCCAGK
TGACCTTTGCCCCA--

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----YTCTGTCCCAGK
NNNNTTGTGTGCTTNN

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YTCTGTCCCAGK
TGCTGASTCAGC

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YTCTGTCCCAGK-
---TGACTCAGCA

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------YTCTGTCCCAGK--
TTTTTTTTTTTTTTCAGGTT

MA0099.2_JUN::FOS/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YTCTGTCCCAGK
---TGACTCA--

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YTCTGTCCCAGK
--ATGACTCATC

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:YTCTGTCCCAGK-------
---TGACCCAGTGACCTAC