Information for motif28


Reverse Opposite:

p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.754
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif13.04%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif2.19%
Average Position of motif in Targets113.6 +/- 62.8bp
Average Position of motif in Background95.8 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGGGGGAGCTG
GGGCGGGACC--

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGGGAGCTG-
GGGGGGGGGGGGGGA

PB0100.1_Zfp740_1/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGGAGCTG
NANNTGGGGGGGGNGN--

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGGGGGAGCTG
AGGGGGCGGGGCTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGGGGGAGCTG
GGGGGGGG-----

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGGGAGCTG-
GGCGGGGGCGGGGG

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGGGAGCTG
GGGGGCGGGGC--

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGGGGAGCTG
CGGGCGGGAGG--

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGGGGAGCTG
GGGCGGGAAGG-

MA0469.1_E2F3/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGGAGCTG
NNGTGNGGGCGGGAG---