Information for motif29


Reverse Opposite:

p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.662
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets112.6 +/- 60.7bp
Average Position of motif in Background144.0 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0467.1_Crx/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CDAAAAGGCTAA-
--AAGAGGATTAG

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CDAAAAGGCTAA---
TAAAAATGCTGACTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CDAAAAGGCTAA----
-AAAWWTGCTGACWWD

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CDAAAAGGCTAA
GNCTATAAAAGG----

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CDAAAAGGCTAA--
GCAAAACATTACTA

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CDAAAAGGCTAA---
AAAAACGGATTATTG

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CDAAAAGGCTAA---
----AAGGATATNTN

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CDAAAAGGCTAA
ANGNAAAGGTCA-

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CDAAAAGGCTAA-----
TGAACCGGATTAATGAA

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CDAAAAGGCTAA
--NANANAC---