Information for motif3


Reverse Opposite:

p-value:1e-20
log p-value:-4.648e+01
Information Content per bp:1.618
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets104.9 +/- 54.3bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGTCGCCC---
--CTGCCCGCA

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGTCGCCC----
TCGACCCCGCCCCTAT

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGTCGCCC-
GCCCCGCCCC

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------CGTCGCCC-
TNAACGACGTCGNCCA

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTCGCCC-
GCCCCACCCA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTCGCCC------
ATCCCCGCCCCTAAAA

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTCGCCC---
NAGCCCCGCCCCCN

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTCGCCC------
TCACCCCGCCCCAAATT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCGCCC-
GCCMCRCCCH

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGTCGCCC--
GGCCCCGCCCCC