Information for motif33


Reverse Opposite:

p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.578
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif12.42%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif2.19%
Average Position of motif in Targets86.8 +/- 54.9bp
Average Position of motif in Background86.6 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACAYMCWCCTC
GGCCACACCCAN---

MA0493.1_Klf1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACAYMCWCCTC
GGCCACACCCA----

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CACAYMCWCCTC
AGCGGCACACACGCAA-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACAYMCWCCTC
GCCACACCCA----

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACAYMCWCCTC
ACCACATCCTGT--

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACAYMCWCCTC
-ACTTCCTBGT-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAYMCWCCTC
GCCMCRCCCH----

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACAYMCWCCTC
CACTTCCTCT--

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CACAYMCWCCTC
CAAACCACAAACCCC--

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACAYMCWCCTC
GCCCCACCCA----