Information for motif35


Reverse Opposite:

p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.862
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif10.56%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets66.8 +/- 54.3bp
Average Position of motif in Background66.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:YTTTTTTTCC----
TTTTTTTTCNNGTN

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----YTTTTTTTCC---
NNNNTTTTTTTTTNAAC

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--YTTTTTTTCC---
NNTTTNTTTTNGNNN

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.74
Offset:4
Orientation:forward strand
Alignment:YTTTTTTTCC-
----TTTTCCA

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----YTTTTTTTCC---
GNATTTTTTTTTTGANC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:YTTTTTTTCC---
---ATTTTCCATT

MA0481.1_FOXP1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:YTTTTTTTCC-----
CTTTGTTTACTTTTN

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-YTTTTTTTCC
CCTTTGTTTT-

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YTTTTTTTCC
NTTTTATGAC

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YTTTTTTTCC---
TNNTCCTTTGTTCTNNT