Information for motif38


Reverse Opposite:

p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.823
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.45%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets98.5 +/- 63.3bp
Average Position of motif in Background73.0 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGATC---
GNNACCGAGAATNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGATC---
NNNACCGAGAGTNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCGAGATC---
TTGACCGAGAATTCC

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGATC-----
NGCTGCGATATCGNCGC

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGAGATC--
CAAAGGTCAG

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGATC------
NNNCTGATATCTCNNNN

MA0512.1_Rxra/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGAGATC---
CAAAGGTCAGA

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCGAGATC---
CCAAGGTCACA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CCGAGATC-
GTTCTCGCGAGANCC

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGAGATC------
AAGGCGAAATCATCGCA