Information for motif6


Reverse Opposite:

p-value:1e-18
log p-value:-4.314e+01
Information Content per bp:1.627
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif11.18%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets72.2 +/- 50.3bp
Average Position of motif in Background186.5 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CTTAGACAGCTG
----AACAGCTG

MA0521.1_Tcf12/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CTTAGACAGCTG---
----AACAGCTGCAG

MA0500.1_Myog/Jaspar

Match Rank:3
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CTTAGACAGCTG---
----GACAGCTGCAG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CTTAGACAGCTG-
---NNACAGCTGC

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CTTAGACAGCTG-
---BAACAGCTGT

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:CTTAGACAGCTG---
-----HCAGCTGDTN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:5
Orientation:forward strand
Alignment:CTTAGACAGCTG---
-----NCAGCTGCTG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CTTAGACAGCTG----
----AGCAGCTGCTNN

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CTTAGACAGCTG---
-----ACAGCTGTTN

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTTAGACAGCTG--
-NGNGACAGCTGCN