| p-value: | 1e-36 |
| log p-value: | -8.396e+01 |
| Information Content per bp: | 1.736 |
| Number of Target Sequences with motif | 34.0 |
| Percentage of Target Sequences with motif | 33.01% |
| Number of Background Sequences with motif | 1.3 |
| Percentage of Background Sequences with motif | 1.82% |
| Average Position of motif in Targets | 118.2 +/- 56.4bp |
| Average Position of motif in Background | 55.1 +/- 27.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.31 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTGCYTGT
TTAAGTGCTT-- |
|
|
|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GTGCYTGT
CTGTTCCTGG |
|
|
|
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTGCYTGT
NNTGTGGTTT- |
|
|
|
MA0130.1_ZNF354C/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GTGCYTGT
GTGGAT-- |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.60
| | Offset: | -8
| | Orientation: | reverse strand |
| Alignment: | --------GTGCYTGT
NNNNTTGTGTGCTTNN |
|
|
|
PB0152.1_Nkx3-1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GTGCYTGT---
TTCNAAGTACTTNNNNN |
|
|
|
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTGCYTGT
NNHTGTGGTTWN |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GTGCYTGT
TTAAGTGGA--- |
|
|
|
MA0147.2_Myc/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GTGCYTGT
CCATGTGCTT-- |
|
|
|
PB0151.1_Myf6_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTGCYTGT----
GGNGCGNCTGTTNNN |
|
|
|
