Information for motif10


Reverse Opposite:

p-value:1e-17
log p-value:-4.142e+01
Information Content per bp:1.707
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif20.39%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets91.3 +/- 62.9bp
Average Position of motif in Background146.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TATGAATTCT
NNTNTCATGAATGT-

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TATGAATTCT----
NNNNTGAATTCANNNC

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TATGAATTCT----
TNNNATGATTTCNNCNN

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TATGAATTCT---
NTTNTATGAATGTGNNC

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATGAATTCT----
NNATNAATTGTTTNN

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TATGAATTCT--
NNNTATTGAATTGNNN

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TATGAATTCT------
GTATCTATTGTTCTTTA

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TATGAATTCT------
GGAAAAATTGTTAGGAA

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATGAATTCT------
--AAAATTGTTATGAA

MA0479.1_FOXH1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATGAATTCT-
TGTGGATTNNN