Information for motif2


Reverse Opposite:

p-value:1e-33
log p-value:-7.689e+01
Information Content per bp:1.645
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif31.07%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets106.7 +/- 59.6bp
Average Position of motif in Background66.7 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACATTCCADT
GCATTCCAGN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACATTCCADT--
GGCAAAAGTCCAATAA

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACATTCCADT-
CACATTCCTCCG

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACATTCCADT----
NANTATTATAATTNNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACATTCCADT
RCATTCCWGG

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACATTCCADT---
TNGAATTTCATTNAN

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACATTCCADT-
GAAAAAATTGCAAGG

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACATTCCADT----
TAAGATTATAATACGG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACATTCCADT
ATTTTCCATT

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACATTCCADT----
NNTAATTATAATTNNN