Information for motif20


Reverse Opposite:

p-value:1e-15
log p-value:-3.490e+01
Information Content per bp:1.576
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif23.30%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif3.37%
Average Position of motif in Targets117.9 +/- 56.6bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGTWATC-
-YSTTATCT

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGGTWATC----
TAGTGATCATCATTA

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGGTWATC------
NNANTCTTATCTNNNNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGGTWATC---
-YCTTATCWVN

MA0036.2_GATA2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGGTWATC---
AGATTCTTATCTGT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGGTWATC-
-GCTAATCC

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGTWATC-------
NTTGTTAATCCCTCTNN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGTWATC--
NNCTTATCTN

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGTWATC-------
-NNTAATCCNGNCNN

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGTWATC-------
ATAGTTAATCCCCCNNA