Information for motif22


Reverse Opposite:

p-value:1e-14
log p-value:-3.288e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif17.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets105.7 +/- 58.4bp
Average Position of motif in Background39.3 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TACTACTGTG---
TNNTGCTACTGTNNNN

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TACTACTGTG---
CNNNGCTACTGTANNN

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TACTACTGTG---
NNTCCTGCTGTGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TACTACTGTG---
TNTCCTGCTGTGNNG

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TACTACTGTG
----GCTGTG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TACTACTGTG
CCCCCTGCTGTG

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACTACTGTG-
---TACTNNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TACTACTGTG---
TCNCCTGCTGNGNNN

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TACTACTGTG----
NNNCCATTGTGTNAN

MA0027.1_En1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TACTACTGTG
GANCACTACTT--