Information for motif23


Reverse Opposite:

p-value:1e-14
log p-value:-3.288e+01
Information Content per bp:1.670
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif17.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif2.57%
Average Position of motif in Targets113.3 +/- 54.4bp
Average Position of motif in Background128.0 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0017.1_NR2F1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGYMVAGCW--
AGGTTCAAAGGTCA

MA0484.1_HNF4G/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGYMVAGCW--
AGAGTCCAAAGTCCA

MA0114.2_HNF4A/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGYMVAGCW---
NAGNNCAAAGTCCAN

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGYMVAGCW--
CANAGNNCAAAGTCCA

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTGYMVAGCW-
NNGTATGTGCACATNNN

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGYMVAGCW-
GCCGCGCAGTGCGT

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GTGYMVAGCW-
NTNTATGTGCACATNNN

MA0504.1_NR2C2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTGYMVAGCW--
AGGGGTCAGAGGTCA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGYMVAGCW
CTGTTCCTGG--

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTGYMVAGCW
-----CAGCC