Information for motif31


Reverse Opposite:

p-value:1e-11
log p-value:-2.752e+01
Information Content per bp:1.620
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif15.53%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets108.8 +/- 54.4bp
Average Position of motif in Background137.9 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CCAAGCCG
AAATGGACCAATCAG

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGCCG
TGCCAA----

MA0060.2_NFYA/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGCCG------
TGGACCAATCAGCACTCT

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCCG
AGCCAATCGG

MA0133.1_BRCA1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAAGCCG
ACAACAC-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAAGCCG
--CAGCC-

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCCG
AGCGCGCC-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAAGCCG
-CACGCA-

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGCCG---
NNGGCCACGCCTTTN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAAGCCG
CTAGGCCT