Information for motif34


Reverse Opposite:

p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.598
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif24.27%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif6.47%
Average Position of motif in Targets82.9 +/- 50.2bp
Average Position of motif in Background96.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AAGACCWGCT-
---GCCATCTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGACCWGCT---
---GCCATCTGTT

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGACCWGCT------
-TNTCCTGCTGTGNNG

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGACCWGCT------
-NNTCCTGCTGTGNNN

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGACCWGCT---
-CCCCCTGCTGTG

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGACCWGCT------
-TCNCCTGCTGNGNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAGACCWGCT-
------NGCTN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGACCWGCT--
--NAHCAGCTGD

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAGACCWGCT
ADGGYAGYAGCATCT

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGACCWGCT-
---ANCAGCTG