Information for motif35


Reverse Opposite:

p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.538
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif31.07%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif10.61%
Average Position of motif in Targets114.1 +/- 56.6bp
Average Position of motif in Background120.9 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GMACTGAC
--CATGAC

MA0067.1_Pax2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GMACTGAC-
-NCGTGACN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GMACTGAC--
CGGAAGTGAAAC

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GMACTGAC-
CCAACTGCCA

POL002.1_INR/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMACTGAC
NNNANTGA-

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GMACTGAC
AAGCACTTAA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GMACTGAC--
----TGACGT

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GMACTGAC------
AAAAATAACAAACGG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GMACTGAC--
----TGACCT

MA0498.1_Meis1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GMACTGAC----
NNNTGAGTGACAGCT