Information for motif4


Reverse Opposite:

p-value:1e-26
log p-value:-6.133e+01
Information Content per bp:1.618
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif33.01%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif3.49%
Average Position of motif in Targets87.9 +/- 56.0bp
Average Position of motif in Background57.7 +/- 47.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAAATAAAAAST--
GGAAANTGAAACTNA

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAAATAAAAAST
GAAACTGAAACT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAATAAAAAST
GAAASYGAAASY

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAATAAAAAST
GAAAGTGAAAGT

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAAATAAAAAST-
AACAAACAACAAGAG

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAAATAAAAAST--
GTTCAAAAAAAAAATTC

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAATAAAAAST--
GTTAAAAAAAAAAATTA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAATAAAAAST--
CAAAATCGAAACTAA

MA0050.2_IRF1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATAAAAAST----
AAANNGAAAGTGAAAGTAAAN

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAATAAAAAST
GTCATAAAAN--