Information for motif5


Reverse Opposite:

p-value:1e-26
log p-value:-6.002e+01
Information Content per bp:1.642
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif26.21%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets78.9 +/- 61.5bp
Average Position of motif in Background168.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTGAG----
NAAANTTATTGAANCAN

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTATTGAG-----
GACGATAATGAGCTTGC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTATTGAG-----
AAACATAATGAGGTTGC

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTATTGAG----
NNANTGATTGATNNNN

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTATTGAG--
TAATTGATTA

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTATTGAG----
NNANTGATTGATNTTN

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTATTGAG--
NTATYGATCH

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTATTGAG--
TATCATAATTAAGGA

MA0075.1_Prrx2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTATTGAG
TAATT---

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTATTGAG
CTAATKGV-