Information for motif6


Reverse Opposite:

p-value:1e-25
log p-value:-5.864e+01
Information Content per bp:1.694
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif36.89%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif5.15%
Average Position of motif in Targets115.7 +/- 47.9bp
Average Position of motif in Background95.3 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AAATTCCT--
GCATTCCAGN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AAATTCCT--
RCATTCCWGG

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAATTCCT---
CACATTCCTCCG

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTCCT
GGAAATTCCC

MA0081.1_SPIB/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAATTCCT--
---TTCCTCT

MA0105.3_NFKB1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAATTCCT
GGGAAATTCCC

MA0107.1_RELA/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAATTCCT
GGAAATTCCC

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATTCCT-
TACTTCCTT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAATTCCT---
-ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAATTCCT-
-ATTTCCTG