Information for motif1


Reverse Opposite:

p-value:1e-22
log p-value:-5.111e+01
Information Content per bp:1.651
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets95.1 +/- 59.7bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATGATGCC--
MTGATGCAAT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGATGCC--
ATGATGCAAT

MA0488.1_JUN/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATGATGCC--
AAGATGATGTCAT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATGATGCC-
NATGTTGCAA

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGCC-----
ANNNATGATACCCCATC

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGCC-----
ANANNTGATACCCNATN

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGCC-----
AATNTTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGCC-----
ANANNTGATACCCTATN

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGATGCC---
AAAGATGATGTCATC

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGCC-----
ANANGTGATACCCCATT