Information for motif12


Reverse Opposite:

p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.684
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif18.42%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets103.9 +/- 51.1bp
Average Position of motif in Background123.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CARSATCCTGCR
--ACATCCTGNT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CARSATCCTGCR
--NNCACCTGNN

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CARSATCCTGCR
------GCTGTG

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CARSATCCTGCR----
-RGSMTBCTGGGAAAT

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CARSATCCTGCR--
CCCACTTCCTGTCTC

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CARSATCCTGCR
--ACTTCCTGTT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CARSATCCTGCR---
NNTNCGCACCTGTNGAN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CARSATCCTGCR
-CACTTCCTGT-

MA0475.1_FLI1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CARSATCCTGCR
CCACTTCCTGT-

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CARSATCCTGCR---
---CCCCCTGCTGTG