Information for motif13


Reverse Opposite:

p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.667
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif18.42%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets105.4 +/- 55.0bp
Average Position of motif in Background63.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAHYTTRGATK---
TATCATTAGAACGCT

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAHYTTRGATK-----
-CTACTAGGATGTNNTN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAAHYTTRGATK-
---CCTTTGATGT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAAHYTTRGATK-
---CCTTTGAWGT

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAHYTTRGATK----
AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAHYTTRGATK----
ATTTCCTTTGATCTATA

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AAAHYTTRGATK----
NNTTCCTTTGATCTANA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AAAHYTTRGATK--
----NCTGGAATGC

MA0161.1_NFIC/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AAAHYTTRGATK
-----TTGGCA-

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AAAHYTTRGATK-
-TNCCTTTGATGT