| p-value: | 1e-12 |
| log p-value: | -2.779e+01 |
| Information Content per bp: | 1.745 |
| Number of Target Sequences with motif | 13.0 |
| Percentage of Target Sequences with motif | 17.11% |
| Number of Background Sequences with motif | 0.4 |
| Percentage of Background Sequences with motif | 0.36% |
| Average Position of motif in Targets | 78.7 +/- 41.0bp |
| Average Position of motif in Background | 11.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.72
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGGCAGTCCC--
GGGGATTCCCCC |
|
|
|
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
| Match Rank: | 2 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGGCAGTCCC--
GGGAAATCCCCN |
|
|
|
MA0105.3_NFKB1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GGGCAGTCCC
GGGAAATTCCC |
|
|
|
MF0003.1_REL_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.68
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGGCAGTCCC
GGAAATCCCC |
|
|
|
MA0101.1_REL/Jaspar
| Match Rank: | 5 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GGGCAGTCCC
GGGGATTTCC- |
|
|
|
MA0597.1_THAP1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GGGCAGTCCC
TNNGGGCAG---- |
|
|
|
MA0107.1_RELA/Jaspar
| Match Rank: | 7 |
| Score: | 0.66
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGGCAGTCCC
GGAAATTCCC |
|
|
|
PB0133.1_Hic1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.64
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GGGCAGTCCC
NNNNTTGGGCACNNCN |
|
|
|
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer
| Match Rank: | 9 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GGGCAGTCCC
GGAAATTCCC |
|
|
|
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---GGGCAGTCCC
CGTGGGTGGTCC- |
|
|
|
