Information for motif16


Reverse Opposite:

p-value:1e-12
log p-value:-2.779e+01
Information Content per bp:1.753
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif17.11%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets109.9 +/- 55.4bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:DGAAAAGAGAAM----
-AGAAAGTGAAAGTGA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:DGAAAAGAGAAM--
--GAAAGTGAAAGT

MA0051.1_IRF2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:DGAAAAGAGAAM-------
-GGAAAGCGAAACCAAAAC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:DGAAAAGAGAAM--
--GAAAGTGAAAGT

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:DGAAAAGAGAAM--
GCAAAACATTACTA

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:DGAAAAGAGAAM--
--GAAACTGAAACT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:DGAAAAGAGAAM--
--GAAASYGAAASY

MA0029.1_Mecom/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-DGAAAAGAGAAM-
AAGATAAGATAACA

MA0050.2_IRF1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---DGAAAAGAGAAM------
AAANNGAAAGTGAAAGTAAAN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:DGAAAAGAGAAM----
-GGAAANTGAAACTNA