Information for motif18


Reverse Opposite:

p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.819
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets109.2 +/- 47.6bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCC--
NNACTTGCCTT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCCTTGCC
CCCCCCCC

MA0155.1_INSM1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGCC-
CGCCCCCTGACA

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCCTTGCC----
---CTGCCCGCA

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGCC---
TGACCTTTGCCCTA

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCCTTGCC--
--CTTGGCAA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGCC----
TGACCTTTGCCCTAN

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGCC---
TGACCTTTGCCCCA

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCTTGCC-
GCCCCGCCCC

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGCC-----
GAGCCCTTGTCCCTAA