| p-value: | 1e-10 |
| log p-value: | -2.425e+01 |
| Information Content per bp: | 1.712 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 19.74% |
| Number of Background Sequences with motif | 2.2 |
| Percentage of Background Sequences with motif | 2.22% |
| Average Position of motif in Targets | 100.1 +/- 51.9bp |
| Average Position of motif in Background | 111.5 +/- 54.9bp |
| Strand Bias (log2 ratio + to - strand density) | 0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.27 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | TGCCTGGCAG
--CTTGGCAA |
|
|
|
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer
| Match Rank: | 2 |
| Score: | 0.67
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TGCCTGGCAG--
NCTTCCNGGAAGNN |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 3 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TGCCTGGCAG--
CTGTCTGTCACCT |
|
|
|
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 4 |
| Score: | 0.66
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TGCCTGGCAG
TTCCNGGAAG |
|
|
|
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 5 |
| Score: | 0.66
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TGCCTGGCAG--
TGTCTGDCACCT |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 6 |
| Score: | 0.66
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TGCCTGGCAG-
NTGATTGACAGN |
|
|
|
MA0518.1_Stat4/Jaspar
| Match Rank: | 7 |
| Score: | 0.64
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGCCTGGCAG
NNNTTTCCTGGAAA |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 8 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TGCCTGGCAG--
TGAGTGACAGSC |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 9 |
| Score: | 0.63
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | TGCCTGGCAG
---TTGGCA- |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TGCCTGGCAG
TTGCGTGCVA- |
|
|
|
